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Scientific topic
- Bioinformatics1
- Comparative transcriptomics1
- FAIR data1
- Findable, accessible, interoperable, reusable data1
- MicroRNA sequencing1
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- RNA sequencing1
- RNA-Seq1
- RNA-Seq analysis1
- Small RNA sequencing1
- Small RNA-Seq1
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- Software integration1
- Tool integration1
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- Transcriptome1
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- Whole transcriptome shotgun sequencing1
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Tool
- BioContainers1
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- SAMtools1
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- UCSC Genome Browser1
- biomaRt1
- ggplot21
- nf-core-rnaseq1
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Content provider
- Centre for Genomic Regulation (CRG)1
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Keyword
- RStudio
- BIoinformatics1
- Nextflow1
- RNA-seq1
- Transcriptomics1
- Workflows1
- nf-co.re1
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Competency level
- Beginner1
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Licence
- MIT License1
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Target audience
- Biologists interested in learning about RNA-seq1
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Author
- Fabian Andrade Lozano
- Erik Hedman3
- Markus Englund2
- Vigilante, Alessandra; Belokhvostova, Dasha; Cain, James;2
- Anna Delgado Tejedor1
- Ansell, Brendan1
- Barugahare, Adele1
- Bourke, Caitlin1
- Carr, Ewan; Ginestet, Cedric; Abdullah, Zahra; Langham, John; Stahl, Daniel;1
- Chandrananda, Dineika1
- Chung, Jessica1
- Conradsen, Cara1
- Crowe, Mark1
- Ding, Ke1
- Doyle, Maria1
- Feher, Kristen1
- Freytag, Saskia1
- Gustafsson, Johan1
- Hamid, Fursham; Lozano Gonzalez, Karla1
- Hamrud, Eva; Thiery, Alex;1
- Herman, E., Rand, E., & Stewart, A.1
- Iacono, Giulia1
- Indrek Seppo1
- Iniesta, Raquel; Agbedjro, Deborah; Shamsutdinova, Diana; Ginestet, Cedric; Abdullah, Zahra; Langham, John; Stahl, Daniel1
- Julia Ponomarenko1
- Jung, Chol-Hee1
- Kandhari, Nitika1
- Luca Cozzuto1
- Ma, Mengyao1
- Moffet, Joel1
- Nelson, Tiffanie1
- Nurlan Kerimov1
- O'Callaghan, A., Ewing, A., & Vallejos, C.1
- Perlaza-Jimenez, Laura1
- Pinzon Perez, William1
- Priit Adler1
- Rand, E1
- Rosello, Fernando1
- Sandoval, Claudia1
- Sarah Bonnin1
- Schreiber, Veronika1
- Tarasova, Ilariya1
- Toni Hermoso Pulido1
- Varshney, Akriti1
- Vigilante, Alessandra;1
- Vigilante, Alessandra; Hamrud, Eva; Thiery, Alex;1
- Williams, Sarah1
- Wolmar Nyberg Åkerström1
- Zhang, Eden1
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Contributor
- Antonia Taiani1
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Resource type
- Course materials1
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Node
- Spain1
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- Active1
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