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Scientific topic
- Tool interoperability
- Bioinformatics1
- Comparative transcriptomics1
- FAIR data1
- Findable, accessible, interoperable, reusable data1
- MicroRNA sequencing1
- Pipelines1
- RNA sequencing1
- RNA-Seq1
- RNA-Seq analysis1
- Small RNA sequencing1
- Small RNA-Seq1
- Small-Seq1
- Software integration1
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- Transcriptome1
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- Whole transcriptome shotgun sequencing1
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Tool
- BioContainers1
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- DESeq1
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- QualiMap1
- RStudio1
- SAMtools1
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- UCSC Genome Browser1
- biomaRt1
- ggplot21
- nf-core-rnaseq1
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Content provider
- Centre for Genomic Regulation (CRG)1
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Keyword
- BIoinformatics1
- Nextflow1
- RNA-seq1
- RStudio1
- Transcriptomics1
- Workflows1
- nf-co.re1
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Competency level
- Beginner1
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Licence
- MIT License1
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Target audience
- Biologists interested in learning about RNA-seq1
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Author
- Fabian Andrade Lozano
- The Carpentries Incubator4
- Biocore@CRG3
- Javi Conejero2
- Amy Heather1
- Anna Delgado Tejedor1
- Annabel Cansdale1
- Anne Luesink1
- Applied Genomics1
- BioNT Training1
- Biodata Analysis Group1
- BovReg1
- Bruno Rodrigues1
- CRUK CI Bioinformatics Core shared training1
- Dockstore1
- Douglas Lowe1
- Emma Rand1
- Evelyn Greeves1
- Fred Hutch Data Science Lab1
- Genome Informatics Facility1
- Gerard Capes1
- Ienasescu, Hans1
- Ivan Topolsky1
- Johan Gustafsson1
- Jorge Buenabad-Chavez1
- Julia Ponomarenko1
- Kalaš, Matúš1
- Kobe Lavaerts1
- Kris Davie1
- Luca Cozzuto1
- Michael Crusoe1
- Michael R. Crusoe1
- Oscar Baruffa1
- R. Burke Squires1
- Rob Finn1
- Romain Feron1
- SIB Swiss Institute of Bioinformatics1
- Sarah Bonnin1
- Sarah Forrester1
- Sateesh_Peri1
- Seqera1
- Steff Taelman1
- Sveinung Gundersen1
- Sydney Informatics Hub1
- Toni Hermoso Pulido1
- Tuur Muyldermans1
- VIB Technologies: Training material and software projects1
- Workflow Languages in R1
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Contributor
- Antonia Taiani1
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Resource type
- Course materials1
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Node
- Spain1
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- Active1
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