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Scientific topic
- Bottom-up proteomics1
- Discovery proteomics1
- MS-based targeted proteomics1
- MS-based untargeted proteomics1
- Metaproteomics1
- Peptide identification1
- Protein and peptide identification1
- Proteomics1
- Quantitative proteomics1
- Targeted proteomics1
- Top-down proteomics1
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Tool
- BLAST
- Galaxy11
- Cutadapt3
- FastQC3
- GraPhlAn3
- MetaPhlAn3
- MultiQC3
- SortMeRNA3
- export2graphlan3
- humann3
- taxonomy_krona_chart3
- Combine Metaphlan and HUMAnN2
- metaQuantome2
- msConvert2
- Biopython1
- EncyclopeDIA1
- FlashLFQ1
- FreeBayes1
- HISAT21
- HUMAnN21
- StringTie1
- Unipept1
- bed to protein map1
- customProDB1
- gffcompare1
- mzToSQLite1
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Content provider
- GTN1
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Keyword
- Proteomics1
- proteogenomics1
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Competency level
- Intermediate1
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Licence
- Creative Commons Attribution 4.0 International1
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Target audience
- Students1
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Author
- Pratik Jagtap
- Coline Royaux2
- James Johnson2
- Lisanna Paladin2
- Subina Mehta2
- Yvan Le Bras2
- Anthony Bretaudeau1
- Bérénice Batut1
- Deepti Varshney1
- Delphine Lariviere1
- Elischa Berger1
- Eric Coissac1
- Frédéric Boyer1
- John Beliveau1
- Katherine Do1
- Najat Amoukou1
- Olivier Norvez1
- Praveen Kumar1
- Ray Sajulga1
- Teresa Müller1
- Timothy J. Griffin1
- Verena Moosmann1
- Wolfgang Maier1
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Contributor
- Björn Grüning1
- Helena Rasche1
- Melanie Föll1
- Nicola Soranzo1
- Saskia Hiltemann1
- Subina Mehta1
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Resource type
- e-learning1
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Related resource
- Associated Training Datasets1
- Associated Workflows1
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