Training materials
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ELIXIR TeSS
e-learning
Building and Annotating Metagenome-Assembled Genomes (MAGs) from Short Metagenomics Paired Reads
•• IntermediateMetagenomics Microbial ecology Sequence assembly Microbiome assembly binning metagenomics microgalaxy -
ELIXIR TeSS
e-learning
Remove contamination and host reads
• BeginnerMetagenomics Microbial ecology Microbiome host-removal metagenomics microgalaxy preprocessing -
ELIXIR TeSS
e-learning
Creation of the labs in the different Galaxy instances for your community
• BeginnerCoDex Community Galaxy Community Building SIG -
ELIXIR TeSS
e-learning
Creation of resources listing Galaxy workflow for your community
• BeginnerCommunity Galaxy Community Building SIG -
ELIXIR TeSS
e-learning
Creation of a Galaxy tutorial table for your community
• BeginnerCommunity Galaxy Community Building SIG -
ELIXIR TeSS
e-learning
Dataset construction for bacterial comparative genomics
• BeginnerGenomics Microbiology Genome Annotation microgalaxy work-in-progress -
ELIXIR TeSS
e-learning
Preview the GTN website as you edit your training material
• BeginnerChoose your own Adventure CodeSpaces Command-line Contributing to the Galaxy Training Material GitPod -
ELIXIR TeSS
e-learning
Contributing to the Galaxy Training Network with GitHub
• BeginnerContributing to the Galaxy Training Material -
ELIXIR TeSS
e-learning
Query an annotated mobile genetic element database to identify and annotate genetic elements (e.g. plasmids) in metagenomics data
• BeginnerMetagenomics Microbial ecology Genomics Microbiology Sequence analysis Mobile genetic elements Microbiome -
ELIXIR TeSS
e-learning
Calculating α and β diversity from microbiome taxonomic data
• BeginnerMetagenomics Microbial ecology Microbiome diversity metagenomics