Materials - TeSSHub

Filter Clear filters
- Date added
- In the last 24 hours
- In the last 1 week
- In the last 1 month
- Scientific topic
- Comparative transcriptomics34
- Transcriptome34
- Transcriptomics34
- Algorithms29
- Computer programming29
- Data structures29
- Programming languages29
- Software development29
- Software engineering29
- Exomes21
- Genome annotation21
- Genomes21
- Genomics21
- Personal genomics21
- Synthetic genomics21
- Viral genomics21
- Whole genomes21
- Biodiversity20
- Biological sequences20
- Sequence analysis20
- Sequence databases20
- Bayesian methods19
- Biostatistics19
- Descriptive statistics19
- Gaussian processes19
- Inferential statistics19
- Markov processes19
- Multivariate statistics19
- Probabilistic graphical model19
- Probability19
- Statistics19
- Statistics and probability19
- Assembly18
- Sequence assembly18
- Computational ecology16
- Ecoinformatics16
- Ecological informatics16
- Ecology16
- Ecosystem science16
- Antimicrobial stewardship14
- Medical microbiology14
- Microbial genetics14
- Microbial physiology14
- Microbial surveillance14
- Microbiological surveillance14
- Microbiology14
- Molecular infection biology14
- Molecular microbiology14
- Community analysis13
- Environmental microbiology13
- Microbial ecology13
- Microbiome13
- Molecular community analysis13
- Epigenomics12
- Metagenomics12
- Shotgun metagenomics12
- Bottom-up proteomics11
- DNA variation11
- Discovery proteomics11
- Genetic variation11
- Genomic variation11
- MS-based targeted proteomics11
- MS-based untargeted proteomics11
- Metaproteomics11
- Mutation11
- Peptide identification11
- Polymorphism11
- Protein and peptide identification11
- Proteomics11
- Quantitative proteomics11
- Somatic mutations11
- Targeted proteomics11
- Top-down proteomics11
- Diffraction experiment7
- Imaging7
- Microscopy7
- Microscopy imaging7
- Optical super resolution microscopy7
- Photonic force microscopy7
- Photonic microscopy7
- Taxonomy7
- De novo genome sequencing5
- Epidemiology5
- Genome sequencing5
- Public health5
- Public health and epidemiology5
- WGS5
- Whole genome resequencing5
- Whole genome sequencing5
- AMR3
- Antibiotic resistance (ABR)3
- Antifungal resistance3
- Antimicrobial resistance3
- Antiprotozoal resistance3
- Antiviral resistance3
- Communicable disease3
- DNA metabarcoding3
- Environmental metabarcoding3
- Exometabolomics3
- Extensive drug resistance (XDR)3
- Show N_FILTERS more
- Tool
- Galaxy192
- FastQC24
- SAMtools19
- MultiQC14
- BEDTools13
- BWA13
- SCANPY12
- Falco11
- DeepTools10
- scikit-learn10
- Cutadapt8
- GEMINI8
- ggplot28
- NanoPlot7
- fastp7
- taxonomy_krona_chart7
- BamTools6
- Bandage6
- FreeBayes6
- JBrowse6
- Trimmomatic6
- QUAST5
- STAR5
- Unicycler5
- anndata5
- Flye4
- MACS4
- MetaPhlAn4
- Trim Galore4
- BCFtools3
- BLAST3
- Bowtie 23
- Bwa-mem23
- Diamond3
- DropletUtils3
- FASTX-Toolkit3
- Galactic Circos3
- Galaxy Image Analysis3
- GraPhlAn3
- HISAT23
- Minimap23
- MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC3
- RSeQC3
- Salmon3
- SortMeRNA3
- Stacks3
- export2graphlan3
- humann3
- kraken23
- scikit-image3
- seqtk3
- snpEff3
- BUSCO2
- Bakta2
- Biopython2
- Cardinal2
- ChIPpeakAnno2
- Combine Metaphlan and HUMAnN2
- DESeq22
- FASTQE2
- GOEnrichment2
- GOseq2
- HUMAnN22
- InterProScan (EBI)2
- JBrowse 22
- KrakenTools2
- MEME2
- MSstats2
- MaxQuant2
- Newick Utilities2
- RStudio2
- SRA Software Toolkit2
- SeqCode2
- UCSC Genome Browser Utilities2
- UMI-tools2
- Vcflib2
- Workflow4Metabolomics2
- annotatemyids2
- bx-python2
- clusterProfiler2
- ewastools2
- gfastats2
- lofreq2
- mothur2
- pilon2
- pyGenomeTracks2
- pycoQC2
- staramr2
- tbl2gff32
- xcms2
- ABRicate1
- Alevin1
- Bowtie1
- Bracken1
- CellProfiler1
- ChiRA1
- Circos1
- Clair31
- Clustal 2 (Clustal W, Clustal X)1
- CoverM1
- Show N_FILTERS more
- Content provider
- GTN345
- PaN Training1
- Show N_FILTERS more
- Keyword
- Galaxy Server administration48
- Single Cell36
- biodiversity23
- Contributing to the Galaxy Training Material21
- Development in Galaxy21
- microgalaxy21
- Statistics and machine learning19
- Transcriptomics18
- Earth Data science16
- Ecology16
- ansible16
- Using Galaxy and Managing your Data15
- interactive-tools15
- Assembly14
- git-gat14
- earth-system13
- jupyter-notebook13
- Epigenetics12
- Introduction to Galaxy Analyses12
- Microbiome12
- paper-replication12
- FAIR Data, Workflows, and Research11
- MIGHTS11
- Proteomics11
- Variant Analysis11
- Teaching and Hosting Galaxy training10
- Genome Annotation9
- prokaryote9
- ocean8
- work-in-progress8
- Foundations of Data Science7
- fair7
- plants7
- 10x6
- DDA6
- EBV dataset6
- EBV workflow6
- Sequence analysis6
- assembly6
- data stewardship6
- jbrowse16
- Imaging5
- dmp5
- elixir5
- español5
- gmod5
- illumina5
- jobs5
- nanopore5
- train-the-trainers5
- transcriptomics5
- QC4
- covid194
- deutsch4
- italiano4
- mouse4
- storage4
- workflows4
- ChIP-seq3
- Digital Humanities3
- GIS3
- Galaxy Community Building3
- Metabolomics3
- RAD-seq3
- Visualisation3
- amr3
- bacteria3
- climate3
- cyoa3
- data import3
- data management3
- deconvolution3
- deploying3
- ecology3
- genetic composition EBV class3
- metabolomics3
- monitoring3
- one-health3
- pangeo3
- ro-crate3
- sc_formats3
- single-cell3
- 16S2
- Bioimaging2
- CoDex2
- Community2
- Data management2
- EML2
- FAIR2
- FAIR Data2
- Image segmentation2
- Metadata2
- Overlay2
- SIG2
- Workflows2
- and Research2
- collections2
- data paper2
- deep-learning2
- essential genes2
- Show N_FILTERS more
- Competency level
- Beginner
- Intermediate76
- Advanced9
- Not specified3
- Show N_FILTERS more
- Licence
- Creative Commons Attribution 4.0 International346
- Show N_FILTERS more
- Target audience
- Students243
- Galaxy Administrators69
- Instructors34
- Show N_FILTERS more
- Author
- Bérénice Batut65
- Helena Rasche63
- Björn Grüning41
- Saskia Hiltemann37
- Simon Gladman25
- Nicola Soranzo22
- Nate Coraor20
- Anton Nekrutenko19
- Yvan Le Bras17
- Anne Fouilloux15
- Marie Josse15
- Mehmet Tekman13
- Anthony Bretaudeau12
- Wendi Bacon12
- Anup Kumar11
- Julia Jakiela11
- Katarzyna Kamieniecka10
- Krzysztof Poterlowicz10
- Maria Doyle10
- Cristóbal Gallardo9
- Fotis E. Psomopoulos9
- Pavankumar Videm9
- Anika Erxleben8
- Dave Clements8
- Delphine Lariviere8
- Khaled Jum'ah8
- Martin Čech8
- Daniel Blankenberg7
- Joachim Wolff7
- Laura Cooper7
- Paul Zierep7
- Clemens Blank6
- Marius van den Beek6
- Melanie Föll6
- Morgan Howells6
- Wolfgang Maier6
- Allegra Via5
- Andrew Mason5
- Anna Syme5
- Anne Pajon5
- Branka Franicevic5
- ELIXIR Goblet Train the Trainers5
- John Chilton5
- Kellie Snow5
- Korneel Hens5
- Munazah Andrabi5
- Nick Juty5
- Patricia Palagi5
- Philippe Rocca-Serra5
- Pratik Jagtap5
- Robert Andrews5
- Sara Morsy5
- Saskia Lawson-Tovey5
- Subina Mehta5
- Xenia Perez Sitja5
- Alex Ostrovsky4
- Alireza Khanteymoori4
- Amirhossein Naghsh Nilchi4
- Cyril Monjeaud4
- Erwan Corre4
- Gildas Le Corguillé4
- Mallory Freeberg4
- Marisa Loach4
- Mira Kuntz4
- Simon Bray4
- Stéphanie Robin4
- Vivek Bhardwaj4
- Youri Hoogstrate4
- Alexandre Cormier3
- Bazante Sanders3
- Beatriz Serrano-Solano3
- Belinda Phipson3
- Daniela Schneider3
- Dannon Baker3
- Diana Chiang Jurado3
- Emma Leith3
- Engy Nasr3
- Fidel Ramirez3
- Florian Christoph Sigloch3
- Florian Heyl3
- Gianmauro Cuccuru3
- Hans-Rudolf Hotz3
- Laila Los3
- Laura Leroi3
- Lucille Delisle3
- Mo Heydarian3
- Nadia Goué3
- Polina Polunina3
- Solenne Correard3
- Torsten Seemann3
- Tristan Reynolds3
- Aysam Guerler2
- Cameron Hyde2
- Camila Goclowski2
- Christopher Barnett2
- Coline Royaux2
- Ekaterina Polkh2
- Eli Chadwick2
- Friederike Dündar2
- Harriet Dashnow2
- Show N_FILTERS more
- Contributor
- Björn Grüning
- Saskia Hiltemann476
- Helena Rasche413
- Bérénice Batut199
- Nicola Soranzo157
- Martin Čech117
- Cristóbal Gallardo90
- Niall Beard83
- Anthony Bretaudeau77
- Nate Coraor66
- Wendi Bacon66
- Armin Dadras58
- Pavankumar Videm56
- Gildas Le Corguillé55
- William Durand54
- Simon Gladman50
- Marius van den Beek46
- Mehmet Tekman44
- Yvan Le Bras43
- Lucille Delisle42
- Teresa Müller42
- Marie Josse37
- Beatriz Serrano-Solano29
- Wolfgang Maier26
- Maria Doyle22
- Anne Fouilloux21
- Anup Kumar21
- Julia Jakiela20
- Tristan Reynolds19
- Khaled Jum'ah17
- Melanie Föll16
- Petros Kountouris16
- Subina Mehta16
- Marisa Loach15
- Paul Zierep15
- Pratik Jagtap15
- Simon Bray15
- Deepti Varshney14
- Bazante Sanders13
- Daniela Schneider13
- David López13
- Donny Vrins13
- Mira Kuntz13
- Anton Nekrutenko12
- Delphine Lariviere12
- Matthias Bernt12
- Pablo Moreno12
- Timothy J. Griffin12
- Gianmauro Cuccuru11
- Katarzyna Kamieniecka11
- Mélanie Petera11
- Peter van Heusden11
- Paul De Geest9
- Elin Kronander8
- Hans-Rudolf Hotz8
- John Chilton8
- Kaivan Kamali8
- Leonid Kostrykin8
- Verena Moosmann8
- Wolmar Nyberg Åkerström8
- Amirhossein Naghsh Nilchi7
- Anna Syme7
- Diana Chiang Jurado7
- Florian Heyl7
- Katherine Do7
- Markus Englund7
- Mattias Strömberg7
- Melissa Burke7
- Morgan Howells7
- Niclas Jareborg7
- Stephan Nylinder7
- Tomas Klingström7
- Yvonne Kallberg7
- Alexandre Cormier6
- Dave Clements6
- Ekaterina Polkh6
- Erik Hedman6
- Mallory Freeberg6
- Sabine Österle6
- Solenne Correard6
- Alex Ostrovsky5
- Alireza Khanteymoori5
- Bert Droesbeke5
- Catherine Bromhead5
- Enis Afgan5
- John Davis5
- Stéphanie Robin5
- Vassilios Ioannidis5
- Andrea Bagnacani4
- Clea Siguret4
- Coline Royaux4
- Daniel Sobral4
- Dave B.4
- Eli Chadwick4
- Fotis E. Psomopoulos4
- Phil Reed4
- Pinar Alper4
- Sotiroula Chatzimatthaiou4
- Tim Beck4
- Alexander Botzki3
- Show N_FILTERS more
- Resource type
- e-learning269
- slides77
- Show N_FILTERS more
- Related resource
- Associated Training Datasets168
- Associated Workflows167
- Jupyter Notebook (with Solutions)13
- Jupyter Notebook (without Solutions)13
- Quarto/RMarkdown Notebook2
- Show N_FILTERS more
- Collection
- ELIXIR hCNV community - collection of courses and materials.1
- ELIXIR Biodiversity Community1
- Show N_FILTERS more
Show materials from all spaces
Show disabled materials
Show materials with broken links
Show archived materials

Training materials

Competency level: Beginner

and Contributors: Björn Grüning

346 materials found

Results per page:

1
2
…
6
7
8
9
10
11
12
13
14
…
34
35