Training materials
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ELIXIR TeSS
e-learning
AI pipeline for annotating marine species (Project Moorev - Marine)
• BeginnerImaging AI segmentation Imaging Marine ecosystems YOLO biodiversity deep learning object detection -
ELIXIR TeSS
e-learning
Comparison of two annotation tools - Helixer and Braker3
•• IntermediateGenomics Sequence assembly Braker3 Genome Annotation Helixer biodiversity eukaryota jbrowse1 -
ELIXIR TeSS
e-learning
Life Traits Ecoregionalization workflow
• BeginnerEcology Biodiversity Ecology biodiversity ecoregions life traits -
ELIXIR TeSS
e-learning
Genome annotation with Braker3
•• IntermediateGenomics Sequence assembly Biodiversity Zoology Plant biology Braker3 Genome Annotation biodiversity eukaryota jbrowse1 -
ELIXIR TeSS
e-learning
Cleaning GBIF data using OpenRefine
• BeginnerEcology Biodiversity Ecology biodiversity data cleaning -
ELIXIR TeSS
e-learning
Ecoregionalization workflow tutorial
• BeginnerEcology Biodiversity EBV workflow Ecology biodiversity earth-system ecology gbif interactive-tools modeling … -
ELIXIR TeSS
e-learning
Decontamination of a genome assembly
• BeginnerSequence assembly Genomics Biodiversity Assembly biodiversity -
ELIXIR TeSS
e-learning
Assembly of the mitochondrial genome from PacBio HiFi reads
• BeginnerSequence assembly Genomics Biodiversity Mitochondria Assembly biodiversity -
ELIXIR TeSS
e-learning
Genome annotation with Helixer
•• IntermediateGenomics Biodiversity Zoology Plant biology Genome Annotation biodiversity eukaryota helixer jbrowse1 -
ELIXIR TeSS
e-learning
Marine Omics identifying biosynthetic gene clusters
• BeginnerEcology Biodiversity Ecology biodiversity earth-system marine omics ocean