Training materials
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ELIXIR TeSS
e-learning
NCBI BLAST+ against the MAdLand
• BeginnerSequence analysis Sequence analysis plants -
ELIXIR TeSS
e-learning
Champs blocs indicators
• BeginnerEcology Biodiversity EBV dataset EBV workflow Ecology biodiversity ecosystem EBV class marine ecosystems -
ELIXIR TeSS
e-learning
Avian influenza viral strain analysis from gene segment sequencing data
•• IntermediateGenetic variation Variant Analysis one-health virology -
ELIXIR TeSS
e-learning
Somatic Variant Discovery from WES Data Using Control-FREEC
• BeginnerGenetic variation Variant Analysis -
ELIXIR TeSS
e-learning
Inferring single cell trajectories with Monocle3
• BeginnerTranscriptomics MIGHTS Single Cell paper-replication -
ELIXIR TeSS
e-learning
Long non-coding RNAs (lncRNAs) annotation with FEELnc
•• IntermediateGenomics Genome Annotation eukaryote -
ELIXIR TeSS
e-learning
Combining single cell datasets after pre-processing
• BeginnerTranscriptomics MIGHTS Single Cell paper-replication -
ELIXIR TeSS
e-learning
Genome Assembly Quality Control
•• IntermediateSequence assembly Biodiversity Data quality management Assembly assembly biodiversity quality control -
ELIXIR TeSS
e-learning
Refining Genome Annotations with Apollo (eukaryotes)
•• IntermediateGenomics Genome Annotation apollo2 biodiversity cyoa eukaryote gmod jbrowse1 -
ELIXIR TeSS
e-learning
From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
• BeginnerGenetic variation Variant Analysis covid19 one-health virology