Training materials
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ELIXIR TeSS
e-learning
Single-cell ATAC-seq standard processing with SnapATAC2
•• Intermediate10x Single Cell epigenetics single-cell -
ELIXIR TeSS
e-learning
Genome-wide alternative splicing analysis
••• AdvancedTranscriptomics Transcriptomics alternative splicing isoform switching -
ELIXIR TeSS
e-learning
Converting NCBI Data to the AnnData Format
• BeginnerSingle Cell data import data management sc_formats -
ELIXIR TeSS
e-learning
Converting between common single cell data formats
• BeginnerSingle Cell data import data management sc_formats -
ELIXIR TeSS
e-learning
Importing files from public atlases
• BeginnerSingle Cell data import data management sc_formats -
ELIXIR TeSS
e-learning
Ocean's variables study
• BeginnerEarth Data science earth-system netcdf data ocean -
ELIXIR TeSS
e-learning
Sentinel 5P data visualisation
• BeginnerEarth Data science atmosphere earth-system satellite data volcano -
ELIXIR TeSS
e-learning
Identification of the micro-organisms in a beer using Nanopore sequencing
• BeginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Microbiome beer citizen science metagenomics microgalaxy nanopore -
ELIXIR TeSS
e-learning
Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
• BeginnerMetagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis … -
ELIXIR TeSS
e-learning
Taxonomic Profiling and Visualization of Metagenomic Data
• BeginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Microbiome metagenomics microgalaxy taxonomic profiling