Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • Spaces
  • Events
  • Materials
  • Workflows
  • Collections
  • e-Learning
  • Learning paths
  • Directory
    • Providers
    • Nodes

TeSSHub makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSSHub in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Public health
    • Biological sequences6
    • Sequence analysis6
    • Sequence databases6
    • Antimicrobial stewardship5
    • Community analysis5
    • De novo genome sequencing5
    • Environmental microbiology5
    • Exomes5
    • Genome annotation5
    • Genome sequencing5
    • Genomes5
    • Genomics5
    • Medical microbiology5
    • Microbial ecology5
    • Microbial genetics5
    • Microbial physiology5
    • Microbial surveillance5
    • Microbiological surveillance5
    • Microbiology5
    • Microbiome5
    • Molecular community analysis5
    • Molecular infection biology5
    • Molecular microbiology5
    • Personal genomics5
    • Synthetic genomics5
    • Viral genomics5
    • WGS5
    • Whole genome resequencing5
    • Whole genome sequencing5
    • Whole genomes5
    • Assembly4
    • Sequence assembly4
    • Epidemiology3
    • Epigenomics3
    • Metagenomics3
    • Public health and epidemiology3
    • Shotgun metagenomics3
    • Taxonomy3
    • AMR2
    • Antibiotic resistance (ABR)2
    • Antifungal resistance2
    • Antimicrobial resistance2
    • Antiprotozoal resistance2
    • Antiviral resistance2
    • DNA metabarcoding2
    • Environmental metabarcoding2
    • Extensive drug resistance (XDR)2
    • Metabarcoding2
    • Multidrug resistance2
    • Multiple drug resistance (MDR)2
    • Multiresistance2
    • Pandrug resistance (PDR)2
    • RNA metabarcoding2
    • Total drug resistance (TDR)2
    • eDNA metabarcoding2
    • eRNA metabarcoding2
    • Biodiversity1
    • Communicable disease1
    • Comparative transcriptomics1
    • Computational ecology1
    • DNA variation1
    • Ecoinformatics1
    • Ecological informatics1
    • Ecology1
    • Ecosystem science1
    • Genetic linkage1
    • Genetic variation1
    • Genomic variation1
    • Infectious disease1
    • Linkage1
    • Linkage mapping1
    • Mapping1
    • Mutation1
    • Polymorphism1
    • Somatic mutations1
    • Synteny1
    • Transcriptome1
    • Transcriptomics1
    • Transmissible disease1
    • Show N_FILTERS more
    • Tool
    • Galaxy3
    • Bandage2
    • QUAST2
    • Bakta1
    • Bwa-mem21
    • Falco1
    • FastQC1
    • Filtlong1
    • Flye1
    • JBrowse1
    • NanoPlot1
    • Polypolish1
    • fastp1
    • shovill1
    • staramr1
    • tbl2gff31
    • Show N_FILTERS more
    • Content provider
    • GTN3
    • Show N_FILTERS more
    • Keyword
    • microgalaxy3
    • Assembly2
    • amr2
    • assembly2
    • illumina2
    • Genome Annotation1
    • gmod1
    • jbrowse11
    • nanopore1
    • one-health1
    • Show N_FILTERS more
    • Competency level
    • Beginner
    • Intermediate1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International3
    • Show N_FILTERS more
    • Target audience
    • Students3
    • Show N_FILTERS more
    • Author
    • Bazante Sanders3
    • Bérénice Batut3
    • Show N_FILTERS more
    • Contributor
    • Tristan Reynolds
    • Björn Grüning5
    • Bérénice Batut5
    • Helena Rasche5
    • Saskia Hiltemann5
    • Anthony Bretaudeau3
    • Bazante Sanders3
    • Cristóbal Gallardo3
    • Deepti Varshney3
    • Miaomiao Zhou3
    • Paul Zierep2
    • Wolfgang Maier2
    • pimarin2
    • Engy Nasr1
    • Hans-Rudolf Hotz1
    • Matúš Kalaš1
    • Nate Coraor1
    • Teresa Müller1
    • Verena Moosmann1
    • Willem de Koning1
    • mmiladi1
    • Show N_FILTERS more
    • Resource type
    • e-learning3
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets3
    • Associated Workflows3
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email
  • Harvest using OAI-PMH

Email Subscription

Harvest using OAI-PMH

Exchange content using OAI-PMH

Use an OAI-PMH compatible tool to harvest metadata using the OAI-PMH endpoint. In particular, this endpoint can be used for exchanging content between different TeSS instances. See the TeSS documentation for more details.

Filter limit reached, please log in to apply additional filters.

Scientific topics: Public health

and Contributors: Tristan Reynolds

and Competency level: Beginner

3 materials found
  • ELIXIR TeSS

    e-learning

    Identification of AMR genes in an assembled bacterial genome

    • Beginner
    Genomics Whole genome sequencing Public health and epidemiology Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod …
  • ELIXIR TeSS

    e-learning

    Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)

    • Beginner
    Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly microgalaxy …
  • ELIXIR TeSS

    e-learning

    Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data

    • Beginner
    Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy
Training eSupport System
[email protected]
Contribute
About TeSSHub
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSSHub has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.