Materials - TeSSHub

Filter Clear filters
- Date added
- In the last 24 hours
- In the last 1 week
- In the last 1 month
- Scientific topic
- Data management108
- Metadata management108
- Research data management (RDM)108
- Algorithms89
- Computer programming89
- Data structures89
- Programming languages89
- Software development89
- Software engineering89
- FAIR data82
- Findable, accessible, interoperable, reusable data82
- Exomes47
- Genome annotation47
- Genomes47
- Genomics47
- Personal genomics47
- Synthetic genomics47
- Viral genomics47
- Whole genomes47
- Comparative transcriptomics44
- Transcriptome44
- Transcriptomics44
- Biodiversity43
- Biological sequences36
- Sequence analysis36
- Sequence databases36
- Bayesian methods33
- Biostatistics33
- Descriptive statistics33
- Gaussian processes33
- Inferential statistics33
- Markov processes33
- Metagenomics33
- Multivariate statistics33
- Probabilistic graphical model33
- Probability33
- Shotgun metagenomics33
- Statistics33
- Statistics and probability33
- Bioinformatics32
- Computational ecology30
- Ecoinformatics30
- Ecological informatics30
- Ecology30
- Ecosystem science30
- Community analysis29
- Environmental microbiology29
- Microbial ecology29
- Microbiome29
- Molecular community analysis29
- Assembly23
- Bottom-up proteomics23
- Discovery proteomics23
- MS-based targeted proteomics23
- MS-based untargeted proteomics23
- Metaproteomics23
- Peptide identification23
- Protein and peptide identification23
- Proteomics23
- Quantitative proteomics23
- Sequence assembly23
- Targeted proteomics23
- Top-down proteomics23
- Antimicrobial stewardship20
- Medical microbiology20
- Microbial genetics20
- Microbial physiology20
- Microbial surveillance20
- Microbiological surveillance20
- Microbiology20
- Molecular infection biology20
- Molecular microbiology20
- Open science19
- Cloud computing18
- Computer science18
- HPC18
- High performance computing18
- High-performance computing18
- Diffraction experiment15
- Imaging15
- Microscopy15
- Microscopy imaging15
- Optical super resolution microscopy15
- Photonic force microscopy15
- Photonic microscopy15
- Taxonomy15
- DNA variation13
- Epigenomics13
- Genetic variation13
- Genomic variation13
- Mutation13
- Polymorphism13
- Somatic mutations13
- Applied ontology12
- Ontologies12
- Ontology12
- Ontology and terminology12
- Ontology relations12
- Python12
- Python program12
- Show N_FILTERS more
- Operation
- Data handling41
- File handling41
- File processing41
- Processing41
- Report handling41
- Utility operation41
- Data analysis13
- Data extraction7
- Data retrieval7
- Data retrieval (metadata)7
- Metadata retrieval7
- Retrieval7
- Data visualisation6
- Database retrieval6
- Mathematical modelling6
- Modelling and simulation6
- Molecular visualisation6
- Plotting6
- Query6
- Query and retrieval6
- Rendering6
- Visualisation6
- Database search4
- Normalisation4
- Search4
- Standardisation4
- Standardisation and normalisation4
- Data management planning3
- Data formatting2
- Data reformatting2
- Design2
- File format conversion2
- File formatting2
- File reformatting2
- Format conversion2
- Alignment1
- Alignment construction1
- Alignment generation1
- Allele calling1
- Annotation1
- Data brokering1
- Data deposition1
- Data deposition brokering1
- Data submission1
- Database deposition1
- Database submission1
- Exome variant detection1
- Functional genome annotation1
- Genome annotation1
- Genome variant detection1
- Germ line variant calling1
- Image analysis1
- Metagenome annotation1
- Mutation detection1
- Ontology browsing1
- Ontology visualisation1
- RNA-Seq analysis1
- Read pre-processing1
- Sequence classification1
- Sequence read pre-processing1
- Somatic variant calling1
- Structural genome annotation1
- Variant calling1
- Variant mapping1
- de novo mutation detection1
- Show N_FILTERS more
- Tool
- Galaxy284
- FastQC33
- MultiQC23
- SAMtools22
- BEDTools16
- scikit-learn16
- BWA15
- Data Stewardship Wizard13
- Falco13
- SCANPY13
- DeepTools12
- fastp12
- BLAST11
- Cutadapt10
- ggplot210
- taxonomy_krona_chart10
- GEMINI9
- Bandage8
- FASTX-Toolkit8
- NanoPlot8
- QUAST8
- RStudio8
- FreeBayes7
- JBrowse7
- STAR7
- Trimmomatic7
- BamTools6
- RDMkit6
- Trim Galore6
- Biopython5
- COPASI5
- Flye5
- Galaxy Image Analysis5
- MetaPhlAn5
- Minimap25
- MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
- Salmon5
- Unicycler5
- anndata5
- kraken25
- BUSCO4
- Bowtie 24
- Chipster4
- DESeq24
- Diamond4
- HISAT24
- KrakenTools4
- MACS4
- MaxQuant4
- Ontology Lookup Service4
- Workflow4Metabolomics4
- annotatemyids4
- bx-python4
- mothur4
- scikit-image4
- seqtk4
- snpEff4
- BCFtools3
- Bracken3
- Bwa-mem23
- Clustal 1.8 (Clustal W, Clustal X)3
- DropletUtils3
- European Nucleotide Archive (ENA)3
- GOseq3
- Galactic Circos3
- GraPhlAn3
- MAFFT3
- MSstats3
- Newick Utilities3
- R3
- RSeQC3
- SeqCode3
- SortMeRNA3
- Stacks3
- Zooma3
- export2graphlan3
- humann3
- msConvert3
- xcms3
- Bakta2
- Bowtie2
- BridgeDbR2
- Cardinal2
- CellProfiler2
- ChIPpeakAnno2
- Combine Metaphlan and HUMAnN2
- FASTQE2
- FastTree2
- GECKO2
- GOEnrichment2
- GenomeScope 2.02
- HUMAnN22
- Heinz2
- InterMine2
- InterMineR2
- InterProScan (EBI)2
- JBrowse 22
- MAGeCK2
- MEME2
- Medaka2
- Show N_FILTERS more
- Standard database or policy
- Common Workflow Language2
- European Nucleotide Archive2
- FAIRsharing2
- Minimum Information about Plant Phenotyping Experiment2
- OBO Foundry2
- Ontology Lookup Service2
- PRoteomics IDEntifications database2
- RDA DMP Common Standard for Machine-Actionable Data Management Plans2
- Wheat Data Interoperability Guidelines 1
- Bioschemas1
- Cellosaurus1
- Chemical Entities of Biological Interest1
- Crop Ontology1
- Ensembl1
- IUPAC International Chemical Identifier1
- Identifiers.org Registry1
- Investigation Study Assay JSON1
- Investigation Study Assay Tabular1
- MDL molfile Format1
- ModelArchive1
- Multi-Crop Passport Descriptors1
- Plant Phenotype Experiment Ontology1
- Research Object Crate1
- Resource Identification Portal 1
- STRING: functional protein association networks1
- Schema.org1
- Search Tool for Interactions of Chemicals1
- Simplified Molecular Input Line Entry Specification Format1
- The European Genome-phenome Archive1
- The Human Metabolome Database1
- The Observational Medical Outcomes Partnership Common Data Model1
- UniProt Knowledgebase1
- Wheat Trait Ontology1
- Wikidata1
- Worldwide Protein Data Bank1
- Zenodo 1
- data.eNanoMapper.net1
- eNanoMapper Ontology1
- Show N_FILTERS more
- Content provider
- GTN563
- SIB Swiss Institute of Bioinformatics79
- DTLS - Dutch Techcentre For Life Sciences32
- PaN Training29
- VIB Training & Conferences18
- Bioinformatics and Biomathematics Training Hub16
- ELIXIR13
- ELIXIR Estonia10
- CINECA PROJECT9
- IFB French Institute of Bioinformatics9
- NBIS9
- CSC - IT Center for Science7
- Department of Bioinformatics - BiGCaT, Maastricht University6
- ELXIR-UK DaSH6
- Barcelona Supercomputing Center (BSC)5
- ELIXIR Luxembourg5
- ELIXIR-SI eLearning Platform (EeLP)5
- Glittr.org5
- ELIXIR Norway4
- NanoCommons4
- University of Cambridge Bioinformatics Training4
- Centre for Genomic Regulation (CRG)3
- ELIXIR Portugal3
- European Bioinformatics Institute (EBI)3
- University of Edinburgh3
- de.NBI3
- BioData.pt2
- Danish National Health Data Science Sandbox2
- InterMine2
- Pattern Institute2
- PerMedCoE2
- Bioconductor1
- Cloud-SPAN1
- ELIXIR Slovenia1
- EOSC4Cancer1
- Health-RI1
- Novo Nordisk Foundation Center for Protein Research1
- SciLifeLab1
- Seqera1
- Software Sustainability Institute1
- The Carpentries1
- VIB Conferences1
- WikiPathways1
- eNanoMapper1
- Show N_FILTERS more
- Keyword
- Galaxy Server administration66
- Development in Galaxy45
- Single Cell39
- biodiversity37
- FAIR34
- microgalaxy33
- Foundations of Data Science32
- Ecology30
- Statistics and machine learning29
- Transcriptomics29
- jupyter-notebook29
- training29
- Microbiome28
- FAIR Data, Workflows, and Research26
- data management26
- Contributing to the Galaxy Training Material25
- FAIR principles22
- Genome Annotation21
- Metadata21
- FAIR data20
- Proteomics20
- ansible20
- Assembly19
- Using Galaxy and Managing your Data19
- Python18
- git-gat18
- Earth Data science17
- Open Science17
- fair17
- interactive-tools17
- Data analysis16
- Data management16
- HemaFAIR16
- Introduction to Galaxy Analyses16
- Teaching and Hosting Galaxy training16
- Research Data Management15
- earth-system15
- data stewardship14
- work-in-progress14
- Data management planning13
- Epigenetics13
- FAIR Data13
- metagenomics13
- prokaryote13
- Data reuse12
- Data sharing12
- Roslin Institute12
- Variant Analysis12
- paper-replication12
- CONVERGE11
- European research projects11
- MIGHTS11
- Ontologies11
- Sequence analysis11
- Bioinformatics10
- DMP10
- ELIXIR-CONVERGE10
- genes and genomes10
- metadata10
- ocean10
- plants10
- research data management10
- Standards9
- Workflows9
- cyoa9
- transcriptomics9
- Data management plan8
- Evolution8
- Galaxy Community Building8
- Imaging8
- Metabolomics8
- Programming8
- assembly8
- data visualisation8
- español8
- gmod8
- label-free8
- medicine and health8
- nanopore8
- reproducibility8
- 10x7
- Clinical data7
- DDA7
- Data Management7
- EBV dataset7
- EBV workflow7
- Interoperability7
- R7
- Reproducibility7
- SARS-CoV-27
- dmp7
- ecology7
- jbrowse17
- metabarcoding7
- next generation sequencing7
- programming7
- 16S6
- Computational modelling6
- Data Life Cycle6
- Data Management Plan6
- Show N_FILTERS more
- Competency level
- Beginner
- Not specified7554
- Intermediate298
- Advanced45
- Show N_FILTERS more
- Licence
- Creative Commons Attribution 4.0 International714
- License Not Specified111
- Creative Commons Attribution Share Alike 4.0 International44
- Creative Commons Attribution Non Commercial Share Alike 4.0 International17
- MIT License12
- Other (Not Open)12
- Creative Commons Attribution Non Commercial No Derivatives 4.0 International10
- Apache License 2.05
- Creative Commons Attribution 1.0 Generic5
- Creative Commons Zero v1.0 Universal5
- Creative Commons Attribution Non Commercial 4.0 International4
- Creative Commons Attribution No Derivatives 4.0 International3
- GNU General Public License v3.0 only2
- Creative Commons Attribution Non Commercial 2.0 Generic1
- GNU General Public License v2.0 only1
- Open Data Commons Attribution License v1.01
- Other (Open)1
- Show N_FILTERS more
- Target audience
- Students434
- Galaxy Administrators111
- Instructors49
- Researchers49
- PhD candidate26
- Biologists25
- Life Science Researchers22
- Data stewards21
- PhD candidates20
- Bioinformaticians17
- Scientists17
- Data Scientist16
- Data managers16
- PhD students15
- PhD Students14
- bioinformaticians14
- Data Managers13
- Data Scientists11
- Researcher10
- Researcher in life sciences10
- Beginner9
- Clinicians8
- Life scientists8
- Research Scientists8
- Bench biologists7
- Biomedical Researchers7
- Computational biologists7
- Master students7
- Biomedical researchers6
- PaN Community6
- Scientific community6
- Trainers6
- biologists6
- Chemists5
- ExPaNDS and PaNOSC project members5
- modelers5
- research data engineer5
- Anyone wishing to use bioinformatics resources to find basic information about a virus.4
- Biologists with little or no prior computational experience4
- Laboratory technicians4
- PI4
- PaN users4
- Post Docs4
- Training Designers4
- Training instructors4
- Veterinarians4
- data stewards4
- researchers4
- Academia/ Research Institution3
- Beginners3
- Bioinformatician3
- Bioinformatician, Bioanalysts3
- Biologists, Genomicists, Computer Scientists3
- Curators3
- Data Steward3
- Healthcare3
- Industry3
- Non-Profit Organisation3
- Patient Advocates 3
- Undergraduate students3
- beginner bioinformaticians3
- data curator3
- data managers3
- data steward / data manager3
- engineers3
- instrument scientist3
- life scientists3
- project manager3
- rare disease patients representatives2
- Anyone interested in data standardization and/or the ontology approach (i.e. public, end users).2
- Bioinformaticians, Biologists with little or no prior computational experience.2
- Clinical Scientists2
- Data Manager2
- Database users2
- Graduate Students2
- Graduate students2
- Life Scientists2
- Ontologists2
- PhD2
- PhD Scholars, Graduates and Post Graduates, Professors, Associate Professors, Assistant Professors, Bio instruments Professionals, Bio-informatics Professionals, Directors, CEO’s of Organizations, Supply Chain companies, Manufacturing Companies, Software development companies, Research Institutes and members2
- Post-Doctoral Fellows2
- Postdocs and Staff members2
- Principal Investigators (PIs)2
- Research scientists2
- Staff2
- Technicians2
- biocurators2
- computational scientists2
- facility staff2
- plant researchers2
- policy officer2
- post-docs2
- postdocs2
- scientists2
- software developers, bioinformaticians2
- Anyone1
- Anyone dealing with cell lines with no or little knowledge of the Cellosaurus resource.1
- Anyone wishing to interpret graphs showing the progression of COVID-19.1
- Beginner informatics1
- Beginners in statistics1
- Show N_FILTERS more
- Author
- Helena Rasche94
- Bérénice Batut93
- Saskia Hiltemann53
- SIB Swiss Institute of Bioinformatics50
- Björn Grüning42
- Simon Gladman30
- Yvan Le Bras27
- Nate Coraor25
- Nicola Soranzo24
- Anton Nekrutenko23
- John Chilton23
- Marie Josse19
- Subina Mehta19
- Wendi Bacon18
- Katarzyna Kamieniecka17
- Krzysztof Poterlowicz17
- Anne Fouilloux16
- Anthony Bretaudeau16
- Fotis E. Psomopoulos15
- Mehmet Tekman15
- Paul Zierep15
- Bazante Sanders14
- Mijke Jetten14
- Julia Jakiela13
- Maria Doyle13
- Monique Zahn13
- The Carpentries13
- Anup Kumar12
- Katherine Do12
- Pavankumar Videm11
- Cristóbal Gallardo10
- Dave Clements10
- Donny Vrins10
- Khaled Jum'ah10
- Martin Čech10
- Celia van Gelder9
- Delphine Lariviere9
- Egon Willighagen9
- James Johnson9
- Marius van den Beek9
- Anika Erxleben8
- Daniel Blankenberg8
- Geert van Geest8
- Helen Brown8
- Kaivan Kamali8
- Lucille Delisle8
- Personalized Health Informatics Group8
- Robert Andrews8
- Wandrille Duchemin8
- Branka Franicevic7
- Diana Pilvar7
- Joachim Wolff7
- Laura Cooper7
- Patricia Palagi7
- Pratik Jagtap7
- Sergio Martínez Cuesta7
- Wolfgang Maier7
- Alexander Botzki6
- Allegra Via6
- Andrew Mason6
- Anna Syme6
- Anne Pajon6
- Clemens Blank6
- Coline Royaux6
- ELIXIR Goblet Train the Trainers6
- Melanie Föll6
- Michael Charleston6
- Morgan Howells6
- Philippe Le Mercier6
- Philippe Rocca-Serra6
- Polina Polunina6
- Priit Adler6
- Sara Morsy6
- Valentin Loux6
- Xenia Perez Sitja6
- Alex Ostrovsky5
- Alexandre Cormier5
- Daniela Schneider5
- Dechen Bhuming5
- Deepak Tanwar5
- Diana Chiang Jurado5
- Donat Agosti5
- Emma Leith5
- Erwan Corre5
- Gildas Le Corguillé5
- Heleri Inno5
- Hélène Chiapello5
- Julia Giora5
- Kellie Snow5
- Korneel Hens5
- Laura Leroi5
- Marie-Claude Blatter5
- Marisa Loach5
- Mira Kuntz5
- Munazah Andrabi5
- Nick Juty5
- Plazi Verein5
- Saskia Lawson-Tovey5
- Solenne Correard5
- Stéphanie Robin5
- Show N_FILTERS more
- Contributor
- Saskia Hiltemann475
- Helena Rasche413
- Björn Grüning346
- Bérénice Batut199
- Nicola Soranzo157
- Martin Čech118
- Cristóbal Gallardo90
- Niall Beard83
- Anthony Bretaudeau76
- Nate Coraor67
- Wendi Bacon66
- Armin Dadras58
- Pavankumar Videm56
- Gildas Le Corguillé55
- William Durand54
- Simon Gladman51
- Marius van den Beek46
- Mehmet Tekman44
- Yvan Le Bras43
- Lucille Delisle42
- Teresa Müller42
- Marie Josse37
- Beatriz Serrano-Solano29
- Wolfgang Maier26
- Maria Doyle22
- Anne Fouilloux21
- Anup Kumar21
- Julia Jakiela20
- Tristan Reynolds19
- Khaled Jum'ah17
- Melanie Föll16
- Petros Kountouris16
- Subina Mehta16
- Marisa Loach15
- Paul Zierep15
- Pratik Jagtap15
- Simon Bray15
- Deepti Varshney14
- Bazante Sanders13
- Daniela Schneider13
- David López13
- Donny Vrins13
- Mira Kuntz13
- Anton Nekrutenko12
- Delphine Lariviere12
- Matthias Bernt12
- Pablo Moreno12
- Timothy J. Griffin12
- Gianmauro Cuccuru11
- Katarzyna Kamieniecka11
- Mélanie Petera11
- Peter van Heusden11
- John Chilton9
- Paul De Geest9
- Elin Kronander8
- Hans-Rudolf Hotz8
- Kaivan Kamali8
- Leonid Kostrykin8
- Tomas Klingström8
- Verena Moosmann8
- Wolmar Nyberg Åkerström8
- Amirhossein Naghsh Nilchi7
- Anna Syme7
- Diana Chiang Jurado7
- Florian Heyl7
- Katherine Do7
- Markus Englund7
- Mattias Strömberg7
- Melissa Burke7
- Morgan Howells7
- Niclas Jareborg7
- Stephan Nylinder7
- Yvonne Kallberg7
- Alexandre Cormier6
- Dave Clements6
- Ekaterina Polkh6
- Erik Hedman6
- Mallory Freeberg6
- Sabine Österle6
- Solenne Correard6
- Alex Ostrovsky5
- Alireza Khanteymoori5
- Bert Droesbeke5
- Catherine Bromhead5
- Enis Afgan5
- John Davis5
- Stéphanie Robin5
- Vassilios Ioannidis5
- Andrea Bagnacani4
- Clea Siguret4
- Coline Royaux4
- Daniel Sobral4
- Dave B.4
- Eli Chadwick4
- Fotis E. Psomopoulos4
- Phil Reed4
- Pinar Alper4
- Sotiroula Chatzimatthaiou4
- Tim Beck4
- Alexander Botzki3
- Show N_FILTERS more
- Resource type
- e-learning460
- slides143
- Training materials51
- Video47
- lessons39
- Presentation32
- Slidedeck29
- Tutorial23
- hands-on tutorial17
- Lecture16
- Slides15
- course materials13
- video12
- Webinar10
- Documentation7
- Course materials5
- E-learning5
- Bioinformatics4
- Exercise4
- Online material4
- PDF4
- Scripts4
- Coding3
- E-Learning3
- Handout3
- tutorial3
- youtube video3
- Series of videos2
- Computational Biology2
- Installation instructions2
- Jupyter notebook2
- Learning pathway2
- Manual2
- Vignette2
- online course2
- online tutorial2
- slideck/ presentation2
- API reference1
- Book1
- Carpentries style curriculum1
- Computer Science1
- Computer Software1
- Data Science1
- Document1
- Education1
- Jupyter notebooks1
- Lesson1
- Life Science Literature Database1
- Life Sciences Literature Database1
- Mock data1
- Open educational resource1
- Poster1
- Programming1
- Recorded webinar1
- Recording1
- Toolkit1
- Training materials with mock data1
- ViralZone1
- docker1
- docker-compose1
- e-Learning1
- educational materials1
- examples1
- git1
- hackathon1
- scripts1
- service1
- slides / presentation1
- software1
- tool1
- tutorials1
- wiki1
- workflow1
- Show N_FILTERS more
- Related resource
- Associated Training Datasets259
- Associated Workflows235
- Jupyter Notebook (with Solutions)28
- Jupyter Notebook (without Solutions)28
- The Carpentries7
- Quarto/RMarkdown Notebook3
- DMPonline2
- Slides2
- Workshop recording2
- ALBA's youtube channel1
- CanCOGeN1
- DMP Template for facility users1
- DMPs for Photon and Neutron RIs1
- Data Stewardship Wizard1
- Data Visualisation (theory) 1
- DisProt1
- FAIR for busy biologists1
- FAIR in (biological) practice1
- GEEM1
- Galaxy project guided tours1
- GitHub1
- ICAT documentation1
- Light for cultural heritage1
- Light for food1
- Light for health1
- Light for health (Hepatitis C)1
- Light for the environment1
- Materials on OSF1
- MobiDB1
- Next generation biobanking ontology (NGBO)1
- OpenCloning1
- OpenRefine1
- Public Health Alliance for Genomic Epidemiology1
- R basics1
- RDMO project website1
- RDMkit1
- REPET image Docker1
- Ready For BioData Management?1
- SciCat GitHub1
- SciCat documentation1
- Slides for Introduction to statistics with R 1
- Video Walkthrough of the Poster1
- Video recording1
- Workshop FAIR & Data stewardship for the 2020 ITN ProEVLifeCycle1
- Workshop FAIR & Data stewardship for the 2021 ITN ProEVLifeCycle1
- compareMS21
- pydna1
- recorded guidance on how to install a SciNote account1
- recorded intro to hackathon1
- recorded presentation on integration of ELNs in nanosciences1
- seq-seq-pan1
- Show N_FILTERS more
- Node
- Switzerland87
- Netherlands58
- United Kingdom38
- Belgium24
- Estonia20
- Cyprus16
- EMBL-EBI16
- France15
- Sweden12
- Spain11
- Finland9
- Portugal9
- Slovenia9
- Germany8
- Luxembourg6
- Norway6
- Czech Republic4
- Denmark3
- Greece3
- Italy3
- Israel1
- Show N_FILTERS more
- Collection
- HemaFAIR Training: Applying FAIR Principles in Hematology Research16
- PINK project8
- ELIXIR Biodiversity Community5
- Elements of Data Management5
- RDMbites: Data management essentials5
- SARS-CoV-2 : Studying a new virus5
- ELIXIR SIS-Containers - collection of training materials3
- ELIXIR Toxicology Community3
- ELIXIR Federated Human Data Community2
- 523BET - Nhà Cái 523BET Casino Uy Tín Nhất Việt Nam1
- ELIXIR hCNV community - collection of courses and materials.1
- ELIXIR Systems Biology Community: training events and materials1
- Impact of research infrastructures1
- PHENotyping and EnviroTyping (PHENET training collection)1
- Show N_FILTERS more
- Status
- Active139
- Under development1
- Show N_FILTERS more
Show materials from all spaces
Hide disabled materials
Show materials with broken links
Show archived materials

Training materials

Competency level: Beginner

and Include disabled: true

948 materials found

Results per page:

1
2
…
37
38
39
40
41
42
43
44
45
…
94
95