Training materials
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ELIXIR TeSS
Perl One-liner - Genotoul-bioinfo
•• Intermediatehttp://edamontology.org/topic_3316 -
ELIXIR TeSS
Course materials
Applied Metagenomics - AM22 (October 11-14, 2022)
•• IntermediateMetagenomics Metagenomic sequencing Metagenomics metagenomics Genomic data Genomic sequences genomics Taxonomic concepts Genome assembly Genome Assembly … -
ELIXIR TeSS
Course materials
Applied Metagenomics - AM21 (November 1-5, 2021)
•• IntermediateMetagenomics Metagenomic sequencing Metagenomics metagenomics Genomic data Genomic sequences genomics Taxonomic concepts Genome assembly Genome Assembly … -
ELIXIR TeSS
e-learning
Fine-tuning a LLM for DNA Sequence Classification
•• IntermediateStatistics and probability Large Language Model Statistics and machine learning ai-ml elixir jupyter-notebook -
ELIXIR TeSS
e-learning
Pretraining a Large Language Model (LLM) from Scratch on DNA Sequences
•• IntermediateStatistics and probability Large Language Model Statistics and machine learning ai-ml elixir jupyter-notebook -
ELIXIR TeSS
e-learning
Predicting Mutation Impact with Zero-shot Learning using a pretrained DNA LLM
•• IntermediateStatistics and probability Large Language Model Statistics and machine learning ai-ml elixir jupyter-notebook -
ELIXIR TeSS
e-learning
Generating Artificial Yeast DNA Sequences using a DNA LLM
•• IntermediateStatistics and probability Large Language Model Statistics and machine learning ai-ml elixir jupyter-notebook -
ELIXIR TeSS
e-learning
Optimizing DNA Sequences for Biological Functions using a DNA LLM
•• IntermediateStatistics and probability Large Language Model Statistics and machine learning ai-ml elixir jupyter-notebook work-in-progress -
ELIXIR TeSS
e-learning
Using BioImage.IO models for image analysis in Galaxy
•• IntermediateImaging Deep learning Image annotation Image segmentation Imaging -
ELIXIR TeSS
e-learning
Genome annotation with Braker3
•• IntermediateGenomics Sequence assembly Biodiversity Zoology Plant biology Braker3 Genome Annotation biodiversity eukaryota jbrowse1