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ELIXIR TeSS
e-learning
Data Repositories for Bioinformatics
• BeginnerData management Online Repository Data reuse Data mining FAIR Data -
ELIXIR TeSS
Computer Software, workflow
How to use V-pipe (SARS-CoV-2 data)
• BeginnerVirology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling -
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Course design: Considerations for trainers – a Professional Guide
Curriculum development, course design, learning outcomes, Bloom's Taxonomy, assessment, course evaluation, training trainers, training material
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ELIXIR TeSS
Training materials
Using bioinformatics to hunt SARS-CoV-2, its variants & its origins – a practical guide
• BeginnerBioinformatics for schools, basic bioinformatics, SARS-CoV-2 pandemic, genome analysis, protein sequence analysis, protein structure analysis, virus variants, spike protein, training material -
ELIXIR TeSS
IFB Shiny training
•• IntermediateR-programming Reproducible Science -
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Population Genetics Notes
Population genetics Population genetics
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ELIXIR TeSS
e-learning
BLAST and multiple sequence alignment (MSA) programs
• BeginnerSequence analysis Blast Multiple sequence alignment -
ELIXIR TeSS
BLAST and multiple sequence alignment (MSA) programs
• BeginnerBlast E learning Multiple sequence alignment -
ELIXIR TeSS
e-learning
UNIX Fundamentals
• BeginnerComputer science Problem based learning Programming Unix -
ELIXIR TeSS
Tutorial, Slideshow, e-learning
High Performance Computing (HPC) in Life Sciences
• BeginnerComputer science Bioinformatics Biology High performance computing high-performance computing -
ELIXIR TeSS
e-learning
neXtProt : Exploring human proteins
• BeginnerProteins Proteomics Human biology -
ELIXIR TeSS
e-learning
ISMARA: A tool to infer genome-wide regulatory interactions
• BeginnerSystems biology Gene regulation Transcription factors and regulatory sites Computational modelling Gene regulation -
ELIXIR TeSS
e-learning
Cellosaurus : A resource on cell lines
• BeginnerBiosciences Experimental design and studies basic research Reproducibility cell line -
ELIXIR TeSS
Vital-IT Infrastructure Usage
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ELIXIR TeSS
e-learning
Explore and Visualize Your Data with Python
•• IntermediateData visualisation Bioinformatics Python Data analysis Data visualisation -
ELIXIR TeSS
carpentries-incubator/python-interactive-data-visualizations
Data visualisation Python Data visualization
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ELIXIR TeSS
fastai/course20
Machine learning Statistics and probability Machine learning Statistics
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ELIXIR TeSS
jmacdon/Bioc2020Anno
Genome annotation R Genome annotation
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ELIXIR TeSS
JuliaAcademy/JuliaTutorials
Julia
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ELIXIR TeSS
CompEpigen/BasicR
R script R
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ELIXIR TeSS
Introduction to 3D-Structure Visualization and Homology Modeling using the Swiss-Model Workspace
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ELIXIR TeSS
NBISweden/workshop-RNAseq
Sequencing Transcriptomics RNA-Seq Transcriptomics RNA-seq Next generation sequencing
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ELIXIR TeSS
Bedtools tutorial - sandbox.bio
Genomics Genomics
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ELIXIR TeSS
TheAlgorithms/Python
Python script Python
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ELIXIR TeSS
hds-sandbox/bulk_RNAseq_course
Sequencing Transcriptomics RNA-Seq Transcriptomics RNA-seq Next generation sequencing R
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ELIXIR TeSS
R Basics Quiz
• Beginner -
ELIXIR TeSS
ViralZone
Phylogenetics of animal viral pathogens
• BeginnerAnimal pathogens E learning Phylogenetics -
ELIXIR TeSS
Video, E-learning
FAIR principles in practice for health data
• BeginnerComputer science Data management FAIR data Medical informatics Standardisation and normalisation Design Clinical data RDF Knowledge graph Semantic framework … -
ELIXIR TeSS
NeuromatchAcademy/course-content
Machine learning Statistics and probability Pathway or network Statistics Machine learning Python Pathways and Networks Artificial intelligence
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ELIXIR TeSS
girafe-ai/ml-course
Machine learning Machine learning
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SIB Swiss Institute of Bioinformatics
The SIB Swiss Institute of Bioinformatics is an academic, non-profit foundation recognised of public utility and established in 1998. SIB coordinates research and education in bioinformatics throughout Switzerland and provides high quality bioinformatics services to the national and international...
116 training materials36 events (654 past events)SIB Swiss Institute of Bioinformatics http://www.sib.swiss/training/training-group https://www.tesshub.org/content_providers/swiss-institute-of-bioinformatics The SIB Swiss Institute of Bioinformatics is an academic, non-profit foundation recognised of public utility and established in 1998. SIB coordinates research and education in bioinformatics throughout Switzerland and provides high quality bioinformatics services to the national and international research community. /system/content_providers/images/000/000/011/original/sib_logo_medium.jpg?1662299701 -
Glittr.org
Glittr (https://glittr.org) is a web application that helps you find and compare bioinformatics training materials on GitHub and GitLab.
841 training materialsGlittr.org https://glittr.org https://bioconductor.tesshub.org/content_providers/glittr-org Glittr (https://glittr.org) is a web application that helps you find and compare bioinformatics training materials on GitHub and GitLab. /system/content_providers/images/000/000/692/original/logo-with-domain.png?1698843802 -
BY-COVID
BeYond-COVID (BY-COVID) aims to provide comprehensive open data on SARS-CoV-2 and other infectious diseases across scientific, medical, public health and policy domains. It strongly emphasises mobilising raw viral sequences, helping to identify and monitor the spread of SARS-CoV-2 variants. The...
31 training materialsBY-COVID https://by-covid.org https://rdm.tesshub.org/content_providers/by-covid BeYond-COVID (BY-COVID) aims to provide comprehensive open data on SARS-CoV-2 and other infectious diseases across scientific, medical, public health and policy domains. It strongly emphasises mobilising raw viral sequences, helping to identify and monitor the spread of SARS-CoV-2 variants. The project further accelerates access to SARS-CoV-2 and COVID-19 and linking patient and research data. To ensure interoperability of national and global efforts, BY-COVID enables federated data analysis compliant with data protection regulations, harmonise and manage metadata and sample identifiers, and facilitate long-term cataloguing. In an unprecedented and unique interdisciplinary effort, BY-COVID brings together 53 partners from 19 countries and stakeholders from the biomedical field, hospitals, public health, social sciences and humanities. Ultimately, it will improve European readiness for future pandemics, enhance genomic surveillance and rapid-response capabilities. In addition, BY-COVID serves as a demonstrator of interdisciplinary work across country borders. The project's outputs will allow scientists across multiple domains, including SMEs and industry, to access varied data with the potential to generate new knowledge on infectious diseases. /system/content_providers/images/000/000/810/original/BYCOVID_logo.png?1727690329 -
ERGA Knowledge Hub
The ERGA Knowledge Hub is an open, global home for Biodiversity Genomics teaching resources and courses curated by the European Reference Genome Atlas (ERGA) Community where you can share your lectures, tutorials, workshop materials, other learning tools, or upcoming courses, workshops, and...
134 training materials3 events (22 past events)ERGA Knowledge Hub https://knowledge.erga-biodiversity.eu/ https://bioconductor.tesshub.org/content_providers/erga-knowledge-hub The ERGA Knowledge Hub is an open, global home for Biodiversity Genomics teaching resources and courses curated by the European Reference Genome Atlas (ERGA) Community where you can share your lectures, tutorials, workshop materials, other learning tools, or upcoming courses, workshops, and training events, in any language. /system/content_providers/images/000/000/827/original/ERGA-KH.png?1758638186
Activity log
Switzerland