Switzerland
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An Introduction to Nextflow and nf-core - YouTube
Nextflow
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e-learning
Data Repositories for Bioinformatics
• BeginnerData management Online Repository Data reuse Data mining FAIR Data -
BioNT-Training/building-websites-with-gitlab-en
Version control
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BioNT-Training/hpc-intro-en
High performance computing
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Introduction to Spatial Transcriptomics Data Analysis
• Beginner -
Computer Software, workflow
How to use V-pipe (SARS-CoV-2 data)
• BeginnerVirology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling -
Course design: Considerations for trainers – a Professional Guide
Curriculum development, course design, learning outcomes, Bloom's Taxonomy, assessment, course evaluation, training trainers, training material
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Training materials
Using bioinformatics to hunt SARS-CoV-2, its variants & its origins – a practical guide
• BeginnerBioinformatics for schools, basic bioinformatics, SARS-CoV-2 pandemic, genome analysis, protein sequence analysis, protein structure analysis, virus variants, spike protein, training material -
rstudio-conf-2022/shiny-prod-apps
R script R Shiny
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Introduction to Containers and Snakemake for Reproducible Research
• Beginnercontainer data management high-performance computing reproducibility workflows marc robinson-rechavi group training -
IFB Shiny training
•• IntermediateR-programming Reproducible Science -
Population Genetics Notes
Population genetics Population genetics
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e-learning
BLAST and multiple sequence alignment (MSA) programs
• BeginnerSequence analysis Blast Multiple sequence alignment -
BLAST and multiple sequence alignment (MSA) programs
• BeginnerBlast E learning Multiple sequence alignment -
e-learning
UNIX Fundamentals
• BeginnerComputer science Problem based learning Programming Unix -
Tutorial, Slideshow, e-learning
High Performance Computing (HPC) in Life Sciences
• BeginnerComputer science Bioinformatics Biology High performance computing high-performance computing -
e-learning
neXtProt : Exploring human proteins
• BeginnerProteins Proteomics Human biology -
e-learning
ISMARA: A tool to infer genome-wide regulatory interactions
• BeginnerSystems biology Gene regulation Transcription factors and regulatory sites Computational modelling Gene regulation -
e-learning
Cellosaurus : A resource on cell lines
• BeginnerBiosciences Experimental design and studies basic research Reproducibility cell line -
Vital-IT Infrastructure Usage
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b-rodrigues/rap4all
Workflows R Workflows
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Bayesian foundations of Phylogenetic and Phylodynamic inference (1 of 4) - YouTube
Phylogenetics Statistics and probability Phylogenetics / Phylogenomics Statistics
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e-learning
Explore and Visualize Your Data with Python
•• IntermediateData visualisation Bioinformatics Python Data analysis Data visualisation -
NGS - Genome Variant Analysis
• Beginnermedicine and health,next generation sequencing,training,agriculture,environmental science,medicine and health medicine and health,next generation sequencing,training,agriculture,environmental science,rémy bruggmann group,medicine and health -
Kyrand/dataviz-with-python-and-js-ed-2
Data visualisation Data visualization Data science Python Java
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Functional genomics I | EMBL-EBI Training
Functional genomics Genomics Functional Genomics Reproducibility Genomics
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Introduction to 3D-Structure Visualization and Homology Modeling using the Swiss-Model Workspace
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How to write a Bash script - sandbox.bio
Unix/Linux
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RNA-seq Bioinformatics - Introduction to bioinformatics for RNA sequence analysis
Transcriptomics RNA-Seq Genome annotation Genome assembly RNA-seq Genome annotation Transcriptomics Genome assembly
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Bedtools tutorial - sandbox.bio
Genomics Genomics
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Workshops and courses
Ligand-protein docking, and computer-aided drug design
12 - 13 October 2026
Bern, Switzerland
Face-to-face
proteins and proteomes structural biology homology modelling modelling and simulation protein engineering vincent zoete group olivier michielin & vincent zoete group protein interactions -
Workshops and courses
Genome bioinformatics: from short- to long-read sequencing | EMBL-EBI Training
16 - 20 November 2026
Face-to-face
Sequence read processing Next generation sequencing Long read sequencing -
Workshops and courses
Ligand-protein docking, and computer-aided drug design
12 - 13 October 2026
Bern, Switzerland
Face-to-face
proteins and proteomes structural biology homology modelling modelling and simulation protein engineering vincent zoete group olivier michielin & vincent zoete group protein interactions -
Workshops and courses
Version Control with Git
5 - 6 November 2026
Bern, Switzerland
Face-to-face
programming reproducibility data management training -
Workshops and courses
First Steps with Python in Life Sciences
16 - 18 September 2026
Basel, Switzerland
Face-to-face
data management data visualisation programming reproducibility training torsten schwede & thierry sengstag group mark ibberson group -
Workshops and courses
Introduction to High-performance Computing (sciCORE Cluster)
7 December 2026 @ 09:00 - 17:00
Online
services and resources high-performance computing -
Workshops and courses
ELIXIR-GOBLET Train-the-Trainer
26 - 29 October 2026
Online
training community outreach ELIXIR-GOBLET Train-the-Trainer Train the Trainer #ELIXIR-GOBLET-Train-the-Trainer -
Workshops and courses
Building and Maintaining Scientific Resources
25 November 2026 @ 09:00 - 17:00
Online
-
Workshops and courses
First Steps with R in Life Sciences
5 - 6 October 2026
Geneva, Switzerland
Face-to-face
training biostatistics data visualisation programming torsten schwede & thierry sengstag group -
Workshops and courses
Advanced Programming with R
2 - 4 September 2026
Lausanne, Switzerland
Face-to-face
biostatistics programming reproducibility training -
Workshops and courses
Biology-informed Multiomics Data Integration and Visualization
23 - 25 September 2026
Bern, Switzerland
Face-to-face
-
Workshops and courses
Ligand-protein docking, and computer-aided drug design
12 - 13 October 2026
Bern, Switzerland
Face-to-face
proteins and proteomes structural biology homology modelling modelling and simulation protein engineering vincent zoete group olivier michielin & vincent zoete group protein interactions -
Workshops and courses
Introduction to NGS ATAC-seq data analysis
14 - 15 October 2026
Bern, Switzerland
Face-to-face
-
Workshops and courses
OMICSS-26
No date given
Face-to-face
Genomics Functional genomics Population genetics Single-cell sequencing Genomics Next generation sequencing Unix/Linux Functional Genomics Population genetics Single-cell sequencing -
Workshops and courses
Version Control with Git
28 - 29 October 2026
Online
programming reproducibility data management training -
Workshops and courses
Introduction to Machine Learning with Python
1 - 2 October 2026
Bern, Switzerland
Face-to-face
data mining machine learning training torsten schwede & thierry sengstag group mark ibberson group -
Workshops and courses
Single-Cell Transcriptomics with R
11 - 13 November 2026
Bellinzona, Switzerland
Face-to-face
genes and genomes biochemistry biomarkers experimental biology functional genomics next generation sequencing population genomics single-cell biology training transcriptomics rémy bruggmann group -
Workshops and courses
Advanced Programming with R
24 - 26 August 2026
Lausanne, Switzerland
Face-to-face
biostatistics programming reproducibility training -
Workshops and courses
Introduction to High-performance Computing (sciCORE Cluster)
14 September 2026 @ 09:00 - 17:00
Online
services and resources high-performance computing -
Workshops and courses
Introduction to Small RNA-seq Data Analysis with R
19 - 20 October 2026
Zürich, Switzerland
Face-to-face
-
Workshops and courses
First Steps with Python in Life Sciences
28 - 30 September 2026
Basel, Switzerland
Face-to-face
data management data visualisation programming reproducibility training torsten schwede & thierry sengstag group mark ibberson group -
Workshops and courses
First Steps with R in Life Sciences
5 - 6 October 2026
Geneva, Switzerland
Face-to-face
training biostatistics data visualisation programming torsten schwede & thierry sengstag group -
Workshops and courses
Introduction to Bulk RNA-Seq: From Quality Control to Pathway Analysis
8 - 9 October 2026
Basel, Switzerland
Face-to-face
functional genomics genes and genomes next generation sequencing transcriptomics training torsten schwede & thierry sengstag group -
Workshops and courses
Introduction to Sequencing Data Analysis
21 - 23 October 2026
Zürich, Switzerland
Face-to-face
training genes and genomes next generation sequencing environmental science medicine and health -
Workshops and courses
Introduction to Machine Learning with R
12 - 13 November 2026
Basel, Switzerland
Face-to-face
-
Workshops and courses
Nextflow in Action: Build Smarter, Faster, Reproducible Pipelines
18 - 19 November 2026
Online
-
Workshops and courses
ELIXIR-GOBLET Train-the-Trainer
23 - 26 November 2026
Online
training community outreach ELIXIR-GOBLET Train-the-Trainer Train the Trainer #ELIXIR-GOBLET-Train-the-Trainer -
Workshops and courses
Enrichment Analysis
27 November 2026 @ 09:00 - 17:00
Online
biostatistics experimental biology functional genomics genes and genomes training raphael gottardo group -
Workshops and courses
Biology-informed Integration and Visualisation of Multiomics Data
23 - 25 September 2026
Bern, Switzerland
Face-to-face
-
Workshops and courses
Computer-Aided Drug Design
26 - 28 October 2026
Bern, Switzerland
Face-to-face
proteins and proteomes structural biology homology modelling modelling and simulation protein engineering vincent zoete group olivier michielin & vincent zoete group protein interactions
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SIB Swiss Institute of Bioinformatics
The SIB Swiss Institute of Bioinformatics is an academic, non-profit foundation recognised of public utility and established in 1998. SIB coordinates research and education in bioinformatics throughout Switzerland and provides high quality bioinformatics services to the national and international...
116 training materials33 events (654 past events)SIB Swiss Institute of Bioinformatics http://www.sib.swiss/training/training-group https://tesshub.org/content_providers/swiss-institute-of-bioinformatics The SIB Swiss Institute of Bioinformatics is an academic, non-profit foundation recognised of public utility and established in 1998. SIB coordinates research and education in bioinformatics throughout Switzerland and provides high quality bioinformatics services to the national and international research community. /system/content_providers/images/000/000/011/original/sib_logo_medium.jpg?1662299701 -
Glittr.org
Glittr (https://glittr.org) is a web application that helps you find and compare bioinformatics training materials on GitHub and GitLab.
838 training materialsGlittr.org https://glittr.org https://tess.elixir-europe.org/content_providers/glittr-org Glittr (https://glittr.org) is a web application that helps you find and compare bioinformatics training materials on GitHub and GitLab. /system/content_providers/images/000/000/692/original/logo-with-domain.png?1698843802 -
BY-COVID
BeYond-COVID (BY-COVID) aims to provide comprehensive open data on SARS-CoV-2 and other infectious diseases across scientific, medical, public health and policy domains. It strongly emphasises mobilising raw viral sequences, helping to identify and monitor the spread of SARS-CoV-2 variants. The...
31 training materialsBY-COVID https://by-covid.org https://tess.elixir-europe.org/content_providers/by-covid BeYond-COVID (BY-COVID) aims to provide comprehensive open data on SARS-CoV-2 and other infectious diseases across scientific, medical, public health and policy domains. It strongly emphasises mobilising raw viral sequences, helping to identify and monitor the spread of SARS-CoV-2 variants. The project further accelerates access to SARS-CoV-2 and COVID-19 and linking patient and research data. To ensure interoperability of national and global efforts, BY-COVID enables federated data analysis compliant with data protection regulations, harmonise and manage metadata and sample identifiers, and facilitate long-term cataloguing. In an unprecedented and unique interdisciplinary effort, BY-COVID brings together 53 partners from 19 countries and stakeholders from the biomedical field, hospitals, public health, social sciences and humanities. Ultimately, it will improve European readiness for future pandemics, enhance genomic surveillance and rapid-response capabilities. In addition, BY-COVID serves as a demonstrator of interdisciplinary work across country borders. The project's outputs will allow scientists across multiple domains, including SMEs and industry, to access varied data with the potential to generate new knowledge on infectious diseases. /system/content_providers/images/000/000/810/original/BYCOVID_logo.png?1727690329 -
ERGA Knowledge Hub
The ERGA Knowledge Hub is an open, global home for Biodiversity Genomics teaching resources and courses curated by the European Reference Genome Atlas (ERGA) Community where you can share your lectures, tutorials, workshop materials, other learning tools, or upcoming courses, workshops, and...
128 training materials2 events (20 past events)ERGA Knowledge Hub https://knowledge.erga-biodiversity.eu/ https://tess.elixir-europe.org/content_providers/erga-knowledge-hub The ERGA Knowledge Hub is an open, global home for Biodiversity Genomics teaching resources and courses curated by the European Reference Genome Atlas (ERGA) Community where you can share your lectures, tutorials, workshop materials, other learning tools, or upcoming courses, workshops, and training events, in any language. /system/content_providers/images/000/000/827/original/ERGA-KH.png?1758638186
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