Overview

This full-day course has a practical focus, where participants will learn how to use the Linux command line and interact with the sciCORE cluster. All new users of sciCORE are strongly encouraged to follow this course.

Audience

This course is restricted to members of the University of Basel and associated institutes who want to use the sciCORE cluster. It is designed for PhD students, postdocs, and group leaders without (or very little) experience with Linux and the use of high-performance infrastructures.

Learning outcomes

At the end of the course, the participants should be able to:

• Obtain basic knowledge of the Linux/UNIX environment
• Obtain basic knowledge of high throughput and high performance computing
• Learn how to use the sciCORE infrastructure for scientific applications (including hands-on exercises)
• Tips and tricks for effective and efficient cluster usage (eg compute and storage usage guidelines)
• Discuss particular computing needs and requirements of course participants

Prerequisites

Knowledge / competencies

This course is designed for users and there is [no] requirement... [CONTENT TO FILL]

This course is part of the [XXX + link(s) learning path(s). To get the most out of this course, you should meet the learning outcomes of [XXX + link(s)] course(s). Upon completion of this course, you may wish to attend the [XXX + link(s)] course(s).

Technical

You will need access to a computer. Windows users should install MobaXterm, Linux and Mac users can use the Terminal application.

Schedule – CE(S)T time zone

Application

The course is free of charge, but registration is mandatory. Note that this course is restricted to members of the University of Basel and associated institutes who want to use the sciCORE cluster.

Applications will close on 01.12.2026 or as soon as the places will be filled up. Cancellation after 30.11.2026 will not be reimbursed. Please note that participation in SIB courses is subject to our general conditions.

Venue and Time

The course will be held in Basel.

The course will start at 9:00 and end around 17:00.

Precise information will be provided to the participants on due time.

Additional information

Coordination: Wandrille Duchemin and Rubén Cabezón, SIB Training group.

You are welcome to register to the SIB courses mailing list to be informed of all future courses and workshops, as well as all important deadlines using the form here.

SIB abides by the ELIXIR Code of Conduct. Participants of SIB courses are also required to abide by the same code.

For more information, please contact [email protected].